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Department of Integrative Bioanalytics
Institute of Development, Aging and Cancer, Tohoku University
Journal Club


Tomoaki Shirakawa_No.5
Selected journal : Nature Metabolism Fat sensory cues in early life program central response to food and obesity https://www.nature.com/articles/s42255-025-01405-8 What is the main question of the paper? Can exposure to food odors during early life affect susceptibility to obesity later in life, independently of nutritional content? How did the anthor address the question? ■Step1 1) Separating food odors from nutritional content The authors fed mother mice a bacon-flavored di
20 hours ago2 min read


Yilin Du_No.5
Selected journal : Nature Histone readers MLLT1 and MLLT3 concentrate AID to confer locus specificity https://www.nature.com/articles/s41586-026-11087-1 What is the main question of the paper? How do the histone readers MLLT1 and MLLT3 confer locus specificity by concentrating and licensing activation-induced cytidine deaminase (AID) at immunoglobulin and selected off-target regions? How did the anthor address the question? ■Step1 Establishing MLLT1 and MLLT3 as essential AID
4 days ago2 min read


Otsuki Toshifumi_No.5
Selected journal : Science An in-body networking system for communication between wearable and implantable therapeutics https://doi.org/10.1126/science.adz5300 What is the main question of the paper? Inspired by the ionic signaling of the nervous system, can body tissue itself serve as the conductive medium for signal transmission—in place of power-hungry radio-frequency (RF) electronics—to build a syringe-injectable, near-zero-standby-power in-body network (SWANS) that gives
Oct 72 min read


Xiaoran Ma_No.5
Selected journal : Nature Towards end-to-end automation of AI research https://www.nature.com/articles/s41586-026-10265-5#Abs1 What is the main question of the paper? The main question is whether an artificial intelligence system can autonomously navigate the entire scientific research life cycle, from conception to publication. While previous AI systems could only help with specific, narrow tasks—such as writing literature reviews, coding experiments, or predicting protein s
Sep 302 min read


Yuki Nakamura_No.4
Selected journal : Cell Brain perivascular macrophages regulate endothelial cell function via a cMAF-dependent transcriptional program in mouse and human https://doi.org/10.1016/j.cell.2026.07.043 What is the main question of the paper? What transcriptional programs do perivascular macrophages (PVMs) use to maintain their cellular state and function and to regulate cerebral endothelial cells? How did the anthor address the question? ■Step1 1. Identification of cMAF as a trans
Sep 242 min read


Tomoaki Shirakawa_No.4
Selected journal : Cell Metabolism Remote limb ischemic conditioning alleviates steatohepatitis via extracellular vesicle-mediated muscle-liver crosstalk https://pubmed.ncbi.nlm.nih.gov/40118054/ What is the main question of the paper? Can remote limb ischemic conditioning improve MASH through muscle-to-liver communication, and what molecular mechanism mediates this effect? How did the anthor address the question? ■Step1 RIC improves MASH Chronic remote limb ischemic conditio
Sep 172 min read


Yilin Du_No.4
Selected journal : Nature Universal transcriptomic hallmarks of mammalian ageing and mortality https://www.nature.com/articles/s41586-026-10542-3 What is the main question of the paper? Can universal transcriptomic signatures across mammalian species be used to quantify biological ageing, predict mortality risk, and reveal conserved mechanisms underlying ageing? How did the anthor address the question? ■Step1 1) Construction of a universal transcriptomic ageing model The auth
Sep 92 min read


Otsuki Toshifumi_No.4
Selected journal : Cell Metabolism Iron-addicted colorectal cancers exploit heme–complex II axis to resist oxidative cell death https://www.cell.com/cell-metabolism/fulltext/S1550-4131(26)00185-3 What is the main question of the paper? What metabolic adaptations allow colorectal cancer(CRC) cells to survive under iron-rich environment which is lethal for normal intestinal epithelial cells or non-CRC cells, most cells. How did the anthor address the question? ■Step1 1. In vivo
Aug 272 min read


Xiaoran Ma_No.4
Selected journal : Nature Sleep chart of biological ageing clocks in middle and late life https://www.nature.com/articles/s41586-026-10524-5 What is the main question of the paper? This study aims to answer a fundamental scientific question: What is the optimal daily sleep duration to maintain youthful organ health, and how do sleep extremes (overly short or long) drive systemic diseases, late-life depression, and all-cause mortality through distinct biological pathways? How
Aug 192 min read


Yuki Nakamura_No.3
Selected journal : Cell Macrophage-mediated myelin recycling fuels brain cancer malignancy https://doi.org/10.1016/j.cell.2024.07.030 What is the main question of the paper? How do macrophages within glioblastomas promote tumor malignancy and recurrence? How did the anthor address the question? ■Step1 1. Identification of lipid-laden macrophages (LLMs) Using a genetically modified glioblastoma mouse model, as well as primary tumors and tumors that recurred after radiation the
Aug 52 min read
- Deepening knowledge and connecting the field -
This page is a forum where Lab members can share their individual opinions with the aim of developing scientific thinking skills (setting questions, demonstrating cause and effect, and understanding structure).
Rather than simply "organizing knowledge," we share research papers that provide hints for daily work and research, constantly updating our members' "thinking skills."
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